Sample Datasets

Dataset for microarray analysis
 
For online data import -
Enter GSE14407 or GDS3592 in the dataname field, upload sample annotation file.
Download sample annotation
Select chip-type = hgu133plus2
Control condition = Normal

 

For raw data (celfiles) import -
Download dataset
Download sample annotation
Select chip-type = hgu133plus2
Control condition = Normal
 

For processed data import -
Download dataset
Download sample annotation
Select chip-type = hgu133plus2
Control condition = Normal
 
 
Dataset for ChIP-seq analysis
Download dataset
Download sample annotation
Select file type = sra
 
 

Dataset for RNA-seq analysis
Download dataset
Download sample annotation
 
 

Gene-list for functional analysis
Download file
 
 

Datasets for Automated Workflows
Automated Workflow I - RMaNI
Download dataset
Download sample annotation
Select chip-type = hgu133a
Control condition = Normal

 
 

Automated Workflow II - WGCNA with survival analysis
Download dataset
Download sample annotation
Survival time variable (see sample annotation file) - survivaltime
Event variable (see sample annotation file) - death
Select chip-type = hgu133a